miRBase entry: cte-mir-87b

Stem-loop cte-mir-87b


Accession
MI0010063
Description
Capitella teleta cte-mir-87b precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

ggaguggaaugucgcgugguggcgccugacacuuugacucaaaccucuuuucgugaguagGUGAGCAAAGUUUCAGGUGUAUcugcgcgacugcauuauc
..((((....(((((((((..((((((((.((((((.(((..(((((((.....))).))))))))))))).))))))))..)))))))))..))))...

Structure
-gg    gaau         ug        c      a   aa    -   u 
   agug    gucgcgugg  gcgccuga acuuug cuc  accu cuu u
   ||||    |||||||||  |||||||| |||||| |||  |||| ||| c
   uuac    cagcgcguc  UGUGGACU UGAAAC GAG  UGga gag g
cua    --gu         UA        U      -   --    u   u 


Annotation confidence Not enough data
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Genome context
KB298780.1: 219587-219686 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-87b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-87b

Accession MIMAT0009519
Description Capitella teleta cte-miR-87b mature miRNA
Sequence 61 - GUGAGCAAAGUUUCAGGUGUAU - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68