miRBase entry: cte-mir-29b

Stem-loop cte-mir-29b


Accession
MI0010058
Description
Capitella teleta cte-mir-29b precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

ggaggcucggcgccuggucucacaugguggauagaguuggcuucggcgccauugaaccuuUAGCACCAUUUGAAAUCAGUGcuucuggcucuccuc
(((((((.((.(((((((.(((.((((((..(((((.((((......))))......))))).)))))).))).))))).)).)).))).))))..

Structure
--    -   c  c  -     c   c      ga     -----u    uu 
  ggag gcu gg gc cuggu uca auggug  uagag      uggc  c
  |||| ||| || || ||||| ||| ||||||  |||||      ||||   
  ccuc cgg cu cG GACUA AGU UACCAC  AUuuc      accg  g
cu    u   u  u  U     A   U      -G     caaguu    cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB311026.1: 7583-7678 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-29b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-29b

Accession MIMAT0009514
Description Capitella teleta cte-miR-29b mature miRNA
Sequence 61 - UAGCACCAUUUGAAAUCAGUG - 81
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68