miRBase entry: cte-mir-29a

Stem-loop cte-mir-29a


Accession
MI0010057
Description
Capitella teleta cte-mir-29a precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

aauggggcucuggaauccugguuuucucuggugcauagauuaacgcuuugaauuugugucUAGCACCAUUUGAAAUCAGUUUuccugggugcucac
...((.((((.((((..((((((((...((((((.((((....(((.........)))))))))))))...))))))))..)))).)))).))...

Structure
aau  g    u    uc        cuc      a    uuaa   uuu 
   gg gcuc ggaa  cugguuuu   uggugc uaga    cgc   g
   || |||| ||||  ||||||||   |||||| ||||    |||   a
   uc uggg ccuU  GACUAAAG   ACCACG AUcu    gug   a
cac  g    u    UU        UUU      -    ----   uuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB311026.1: 6875-6970 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-29a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-29a

Accession MIMAT0009513
Description Capitella teleta cte-miR-29a mature miRNA
Sequence 61 - UAGCACCAUUUGAAAUCAGUUU - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68