miRBase entry: cte-mir-10c

Stem-loop cte-mir-10c


Accession
MI0010055
Description
Capitella teleta cte-mir-10c precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

uggagaugaaagucacaaugcccauuGACCCUGUAGAACCGAGCUUGUGuugacuaauugaaaucacaagccuauucuacaguguacaugguuauugcuaa
....(((....))).(((((.((((..((.((((((((..(.(((((((...............))))))))..)))))))).))..)))).)))))....

Structure
uggagaugaaaguca     c    uG  C        CC A       uugacu 
               caaug ccau  AC CUGUAGAA  G GCUUGUG      a
               ||||| ||||  || ||||||||  | |||||||      a
               guuau ggua  ug gacaucuu  c cgaacac      u
-----------aauc     u    ca  u        au -       uaaagu 


Annotation confidence Not enough data
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Genome context
KB310318.1: 317867-317967 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-10c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-10c

Accession MIMAT0009511
Description Capitella teleta cte-miR-10c mature miRNA
Sequence 27 - GACCCUGUAGAACCGAGCUUGUG - 49
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68