miRBase entry: cte-mir-2a

Stem-loop cte-mir-2a


Accession
MI0010047
Description
Capitella teleta cte-mir-2a precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

ggaggaaccgacaaaguggcugcgauguguucucuuccuccuccgauaugcgucgcaccaUAUCACAGCCCGCUUUGUUGACUcugccgugcaauacucuc
((.(((..((((((((((((((.((((((..............((((....))))...)))))).))).)))))))))))..))).)).............

Structure
-------------  a   ac           -   c      uucucuuccuccuc    a 
             gg gga  cgacaaagugg cug gaugug              cgau u
             || |||  ||||||||||| ||| ||||||              ||||  
             cc ucU  GUUGUUUCGCC GAC CUAUac              gcug g
cucucauaacgug  g   CA           C   A      -----------cac    c 


Annotation confidence Not enough data
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Genome context
KB312122.1: 10534-10634 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cte-mir-2a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-2a

Accession MIMAT0009503
Description Capitella teleta cte-miR-2a mature miRNA
Sequence 61 - UAUCACAGCCCGCUUUGUUGACU - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68