Stem-loop sequence bfl-mir-252b

AccessionMI0010043 (change log)
DescriptionBranchiostoma floridae miR-252b stem-loop
Gene family MIPF0000285; mir-252
Stem-loop 
   ----    gcgacug       gc       u     c      a ugcu     c 
5'     gaaa       ucucugu  uaaguag acugc gcaggg g    gugga u
       ||||       |||||||  ||||||| ||||| |||||| |    ||||| g
3'     cuuu       agggaca  auucauc ugacg cguccc c    uaucu a
   uaau    ----aca       ac       c     -      - ----     u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666517.1: 1038237-1038337 [+]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-252b
bfl-mir-252bGG666517.1: 1038237-1038337 [+]
bfl-mir-252aGG666517.1: 1038954-1039054 [+]
Database links

Mature sequence bfl-miR-252b-5p

Accession MIMAT0009499
Previous IDsbfl-miR-252b
Sequence

20 -  

cuaaguaguacugccgcagggag

 - 42

Get sequence
Evidence experimental; 454 [1]

Mature sequence bfl-miR-252b-3p

Accession MIMAT0019151
Previous IDsbfl-miR-252b*
Sequence

63 -  

cccugcgcaguccuacuuacaa

 - 84

Get sequence
Evidence experimental; 454 [2]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).