Stem-loop sequence bfl-mir-216

AccessionMI0010039 (change log)
DescriptionBranchiostoma floridae miR-216 stem-loop
Gene family MIPF0000054; mir-216
Stem-loop 
   ugg   u ua         g   a       ucuaac 
5'    uug g  aucucagcu gca cugugag      u
      ||| |  ||||||||| ||| |||||||       
3'    aac c  uagggucga cgu ggcacuc      u
   uca   u gc         a   -       cuacac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666479.1: 961712-961786 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-216
bfl-mir-216GG666479.1: 961712-961786 [-]
bfl-mir-217GG666479.1: 960802-960869 [-]
Database links

Mature sequence bfl-miR-216-5p

Accession MIMAT0009495
Previous IDsbfl-miR-216
Sequence

9 -  

uaaucucagcuggcaacugugag

 - 31

Get sequence
Evidence experimental; 454 [1]

Mature sequence bfl-miR-216-3p

Accession MIMAT0019150
Previous IDsbfl-miR-216*
Sequence

48 -  

cacggugcaagcugggaucgcu

 - 69

Get sequence
Evidence experimental; 454 [2]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).