Stem-loop bfl-mir-200b

Accession

MI0010036

Description

Branchiostoma floridae bfl-mir-200b precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

acaguuugggaucucggcaacaucuuaccaggcagcauuuaguuuuugaaaggaauacUAAUACUGUCUGGUAAUGAUGUUggugggguucaaacagu
...((((((.((((((.((((((((((((((((((...(((((.(((.....))).)))))..))))))))))).))))))).))))))))))))...

Structure

aca      g      g       -           cau     u   g 
   guuugg aucucg caacauc uuaccaggcag   uuagu uuu a
   |||||| |||||| ||||||| |||||||||||   ||||| ||| a
   caaacu uggggu gUUGUAG AAUGGUCUGUC   AAUca aag a
uga      -      g       U           -AU     u   g 

Annotation confidence Not enough data

Genome context

GG666627.1: 355968-356065 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bfl-mir-200b

Mature bfl-miR-200b

• Accession: MIMAT0009492
• Description: Branchiostoma floridae bfl-miR-200b mature miRNA
• Sequence: 59 - UAAUACUGUCUGGUAAUGAUGUU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68