Stem-loop sequence bfl-mir-92b

AccessionMI0010023 (change log)
DescriptionBranchiostoma floridae miR-92b stem-loop
Gene family MIPF0000013; mir-25
Stem-loop 
   -aagauac     u   g        u    -   u     c    uu     
5'         ggcgu guu cuuagguc ggac agu gcaau uucg  cugu 
           ||||| ||| |||||||| |||| ||| ||||| ||||  ||| u
3'         ccgcg caa gaguccgg ccug uca cguua aagc  gacu 
   acuuuuaa     c   a        c    c   -     c    -c
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666522.1: 372710-372810 [+]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-92b
bfl-mir-92cGG666522.1: 372242-372441 [+]
bfl-mir-92bGG666522.1: 372710-372810 [+]
Database links

Mature sequence bfl-miR-92b-5p

Accession MIMAT0019143
Previous IDsbfl-miR-92b*
Sequence

21 -  

aggucuggacaguugcaaucuu

 - 42

Get sequence
Evidence experimental; 454 [2]

Mature sequence bfl-miR-92b-3p

Accession MIMAT0009479
Previous IDsbfl-miR-92b
Sequence

61 -  

cauugcacucgucccggccuga

 - 82

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).