Stem-loop bfl-mir-22

Accession

MI0010014

Description

Branchiostoma floridae bfl-mir-22 precursor miRNA

Gene family

MIPF0000053; mir-22

Sequence

uacccugagaggcguAGCUCUUCAAACGGUAGCUCUGugguuaccugaucaAAGCUGCCAGAUGAAGAGCUGUgcuuccagggca
..(((((.((((((((((((((((...(((((((...(((((....))))).)))))))...)))))))))))))))))))))..

Structure

ua     a                AAC       CUG     a 
  cccug gaggcguAGCUCUUCA   GGUAGCU   ugguu c
  ||||| ||||||||||||||||   |||||||   |||||  
  gggac cuucgUGUCGAGAAGU   CCGUCGA   acuag c
ac     -                AGA       --A     u 

Annotation confidence Not enough data

Genome context

GG666468.1: 2394933-2395017 [+]

Mature bfl-miR-22-3p

• Accession: MIMAT0009470
• Description: Branchiostoma floridae bfl-miR-22-3p mature miRNA
• Sequence: 52 - AAGCUGCCAGAUGAAGAGCUGU - 73
• Evidence: experimental ; 454 [1]

Mature bfl-miR-22-5p

• Accession: MIMAT0019138
• Description: Branchiostoma floridae bfl-miR-22-5p mature miRNA
• Sequence: 16 - AGCUCUUCAAACGGUAGCUCUG - 37
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27