miRBase entry: bfl-mir-10b

Stem-loop bfl-mir-10b


Accession
MI0010012
Description
Branchiostoma floridae bfl-mir-10b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

acguuuugguggucuauauaAACCCUGUGGAUCCGAUCUUGUGUcgcuauaaaaaccacaaggugggacugacagguucauauagaccacgauaagcaucc
..(((((.(((((((((((.((((.(((.(.(((.((((((((.............)))))))).))).).))))))).))))))))))).).))))....

Structure
--ac    - g           a    C   G A   G        Ucgcu 
    guuu u guggucuauau AACC UGU G UCC AUCUUGUG     a
    |||| | ||||||||||| |||| ||| | ||| ||||||||     u
    cgaa a caccagauaua uugg aca u agg uggaacac     a
ccua    u g           c    -   g c   g        caaaa 


Annotation confidence Not enough data
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Genome context
GG666462.1: 882996-883096 [+]

Database links

Mature bfl-miR-10b

Accession MIMAT0009468
Description Branchiostoma floridae bfl-miR-10b mature miRNA
Sequence 21 - AACCCUGUGGAUCCGAUCUUGUGU - 44
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68