miRBase entry: bfl-mir-10a

Stem-loop bfl-mir-10a


Accession
MI0010011
Description
Branchiostoma floridae bfl-mir-10a precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

cuauaugUACCCUGUAGAUCCGAAUUUGUGugagguacccaagucaCAAAUUCGUUUCUGCAGGUAUaauguagcc
(((((((((((.((((((..(((((((((((..((...))..).))))))))))..))))))))))).))))))..

Structure
--      -     C      UC          - ga  u 
  cuauau gUACC UGUAGA  CGAAUUUGUG u  gg  
  |||||| ||||| ||||||  |||||||||| |  || a
  gaugua UAUGG ACGUCU  GCUUAAACac g  cc  
cc      a     -      UU          u aa  c 


Annotation confidence Not enough data
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Genome context
GG666462.1: 933243-933318 [+]

Database links

Mature bfl-miR-10a-5p

Accession MIMAT0009466
Description Branchiostoma floridae bfl-miR-10a-5p mature miRNA
Sequence 8 - UACCCUGUAGAUCCGAAUUUGUG - 30
Evidence experimental
454 [1]

Mature bfl-miR-10a-3p

Accession MIMAT0009467
Description Branchiostoma floridae bfl-miR-10a-3p mature miRNA
Sequence 47 - CAAAUUCGUUUCUGCAGGUAU - 67
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68