Stem-loop sequence bfl-mir-1

AccessionMI0010008 (change log)
DescriptionBranchiostoma floridae miR-1 stem-loop
Gene family MIPF0000038; mir-1
Stem-loop 
   ----cca          g    a            u  c      ugaa 
5'        ggccuguuaa caua guacuucuuuac au ccauac    c
          |||||||||| |||| |||||||||||| || ||||||    u
3'        ucggacgauu guau uaugaagaaaug ua gguaug    c
   ugcacca          g    g            -  a      uuaa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666601.1: 1444175-1444270 [+]
intergenic
Database links

Mature sequence bfl-miR-1-5p

Accession MIMAT0019137
Previous IDsbfl-miR-1*
Sequence

18 -  

aaguacuucuuuacuaucccau

 - 39

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Evidence experimental; 454 [2]

Mature sequence bfl-miR-1-3p

Accession MIMAT0009463
Previous IDsbfl-miR-1
Sequence

56 -  

uggaauguaaagaaguauguau

 - 77

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).