miRBase entry: bmo-mir-285

Stem-loop bmo-mir-285


Accession
MI0009997
Description
Bombyx mori bmo-mir-285 precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
2 open access papers mention bmo-mir-285
(2 sentences)

Sequence

101 reads, 32 reads per million, 3 experiments
uguccauguuuugacaacuguauucgaguguguggaagaguuuuaaaaauccucUAGCACCAUUCGAAUUCAGUGCucgaacgugguua
...((((((((.((..((((.(((((((((.(((..((((...........))))..)))))))))))).))))..))))))))))...

Structure
ugu        u  ca    u         u   ga    uuuu 
   ccauguuu ga  acug auucgagug gug  agag    a
   |||||||| ||  |||| ||||||||| |||  ||||    a
   ggugcaag cu  UGAC UAAGCUUAC CAC  Ucuc    a
auu        -  CG    U         -   GA    cuaa 


Annotation confidence Not enough data
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Genome context
NW_004582025.1: 2320232-2320320 [-]

Database links

Mature bmo-miR-285

Accession MIMAT0009154
Description Bombyx mori bmo-miR-285 mature miRNA
Sequence 55 - UAGCACCAUUCGAAUUCAGUGC - 76
Evidence experimental
cloned [1], Illumina [2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 18714353
    The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
    Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
    PLoS One (2008) 3:e2997