Stem-loop sly-MIR399

Accession

MI0009979

Description

Solanum lycopersicum sly-MIR399 precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

16 open access papers mention sly-MIR399
(40 sentences)

Sequence

uagggcuacacucuauuggcaugcaacuugaucaaauauuugagcugaaaUGCCAAAGGAGAGUUGCCCUA
((((((.((.((((.(((((((.((.(((((........))))).))..))))))).)))).)).))))))

Structure

      u  a    a       -g  a     uca 
uagggc ac cucu uuggcau  ca cuuga   a
|||||| || |||| |||||||  || |||||    
AUCCCG UG GAGG AACCGUa  gu gaguu   a
      U  A    A       aa  c     uau 

Annotation confidence Not enough data

Genome context

chr3: 3965922-3965992 [+]

Mature sly-miR399

• Accession: MIMAT0009146
• Description: Solanum lycopersicum sly-miR399 mature miRNA
• Sequence: 51 - UGCCAAAGGAGAGUUGCCCUA - 71
• Evidence: not_experimental

References

1. PubMed ID: 18602455
   Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill
   "Zhang J, Zeng R, Chen J, Liu X, Liao Q"
   "Gene (2008) 423:1-7