miRBase entry: mmu-mir-1961

Stem-loop mmu-mir-1961


Accession
MI0009958
Symbol
MGI: Mir1961
Description
Mus musculus mmu-mir-1961 precursor miRNA

Literature search
1 open access papers mention mmu-mir-1961
(2 sentences)

Sequence

5 reads, 1 reads per million, 4 experiments
gcuagccauaucugaaguucaacacgcccuccccucuuccuauacgucuauggaggauuuaccuccauauaccuugagagaUGAGGUAGUAGUUAGAAcuuucauggagcaa
(((..((((....((((((((((((..((((..(((((.......((.((((((((.....)))))))).))...)))))..))))..)).))).))))))).)))))))..

Structure
--   ag    aucu       -   -  gc    cc     ccuauac  c        a 
  gcu  ccau    gaaguuc aac ac  ccuc  cucuu       gu uauggagg u
  |||  ||||    ||||||| ||| ||  ||||  |||||       || |||||||| u
  cga  ggua    uuucAAG UUG UG  GGAG  gagag       ca auaccucc u
aa   --    ---c       A   A  AU    Ua     ----uuc  u        a 


Annotation confidence Not enough data
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Genome context
chr5: 92788451-92788562 [-]

Database links

Mature mmu-miR-1961

Accession MIMAT0009434
Description Mus musculus mmu-miR-1961 mature miRNA
Sequence 82 - UGAGGUAGUAGUUAGAA - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797