miRBase entry: mmu-mir-1955

Stem-loop mmu-mir-1955


Accession
MI0009950
Symbol
MGI: Mir1955
Description
Mus musculus mmu-mir-1955 precursor miRNA

Literature search
2 open access papers mention mmu-mir-1955
(2 sentences)

Sequence

615 reads, 15 reads per million, 79 experiments
cugguuuacuuacuacaAGUCCCAGGAUGCACUGCAGCUUUUucuuaacuucagauaaGAGCAUUGCAUGCUGGGACAUguaguugguuuaaauagca
(((....(((.((((((.(((((((.(((((.(((..(((..(((.......))).))).))).))))).))))))).)))))).))).....)))..

Structure
--   -guuu   u      A       G     C   AG   UU   ua 
  cug     acu acuaca GUCCCAG AUGCA UGC  CUU  ucu  a
  |||     ||| |||||| ||||||| ||||| |||  |||  |||  c
  gau     ugg ugaugU CAGGGUC UACGU ACG  Gaa  aga  u
ac   aaauu   u      A       G     U   -A   -u   cu 


Annotation confidence High
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Genome context
chr2: 92191977-92192074 [+]

Database links

Mature mmu-miR-1955-5p

Accession MIMAT0009426
Description Mus musculus mmu-miR-1955-5p mature miRNA
Sequence 18 - AGUCCCAGGAUGCACUGCAGCUUUU - 42
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature mmu-miR-1955-3p

Accession MIMAT0017348
Description Mus musculus mmu-miR-1955-3p mature miRNA
Sequence 59 - GAGCAUUGCAUGCUGGGACAU - 79
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797