miRBase entry: mmu-mir-1933

Stem-loop mmu-mir-1933


Accession
MI0009922
Symbol
MGI: Mir1933
Description
Mus musculus mmu-mir-1933 precursor miRNA

Literature search
1 open access papers mention mmu-mir-1933
(1 sentences)

Sequence

559 reads, 11 reads per million, 69 experiments
uccugaucccacAGUCAUGGUGUUCGGUCUUAGUUUgugaccaguuuaguuuaaCCAGGACCAUCAGUGUGACUAUuggauugggacu
(((((((((...(((((((.((...((((((.(((...(((.......))).))).))))))..)).)))))))...)))))))))..

Structure
--         cac       G  UUC      A   Ugu   ca 
  uccugaucc   AGUCAUG UG   GGUCUU GUU   gac  g
  |||||||||   ||||||| ||   |||||| |||   |||  u
  aggguuagg   UCAGUGU AC   CCAGGA Caa   uug  u
uc         uUA       G  -UA      C   --u   au 


Annotation confidence High
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Genome context
chr11: 21344588-21344675 [-]

Database links

Mature mmu-miR-1933-5p

Accession MIMAT0009396
Description Mus musculus mmu-miR-1933-5p mature miRNA
Sequence 13 - AGUCAUGGUGUUCGGUCUUAGUUU - 36
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature mmu-miR-1933-3p

Accession MIMAT0009397
Description Mus musculus mmu-miR-1933-3p mature miRNA
Sequence 55 - CCAGGACCAUCAGUGUGACUAU - 76
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797