Stem-loop sequence bta-mir-95

Accession

MI0009910 (change log)

Description

Bos taurus miR-95 stem-loop

Gene family

MIPF0000098; mir-95

Literature search

2 open access papers mention bta-mir-95
(75 sentences)

Stem-loop

   aa     --c   c            uu         g  a 
5'   cacag   ggg gcucaauaaaug  uguugaauu ag u
     |||||   ||| ||||||||||||  ||||||||| || g
3'   guguc   ccc cgaguuauuuau  gcaacuuaa uc c
   --     uca   a            gg         a  g 

Deep sequencing

483 reads, 1.49 reads per million, 67 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr6: 119616064-119616144 [-]
• Overlapping transcripts:

  sense

  ENSBTAT00000021189 ; ABLIM2-201; intron 15

Database links

• EntrezGene:MIR95
• RNAcentral:URS000075CA80_9913
• miRBase Tracker:MI0009910

Mature sequence bta-miR-95

• Accession: MIMAT0009387
• Sequence: 49 - uucaacggguauuuauugagca - 70
• Deep sequencing: 455 reads, 66 experiments
• Evidence: by similarity; MI0010376
• Predicted targets:
  • TargetScanVert:bta-miR-95

References

1. PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2. PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).