miRBase entry: bta-mir-758

Stem-loop bta-mir-758


Accession
MI0009892
Description
Bos taurus bta-mir-758 precursor miRNA
Gene family
MIPF0000126; mir-379

Literature search
2 open access papers mention bta-mir-758
(3 sentences)

Sequence

19 reads, 2 reads per million, 14 experiments
gccuggguacaugagaugguugaccagagagcacacgcuuuauuugugccgUUUGUGACCUGGUCCACUAACCcucaguaucuaaucc
...(((((((.((((.((((.((((((.(.(((.((((.........).))).)))..))))))).))))...)))))))))))....

Structure
-gcc       a    --a    u      a -a   c   - uuu 
    uggguac ugag   uggu gaccag g  gca acg c   a
    ||||||| ||||   |||| |||||| |  ||| ||| |   u
    aucuaug acuc   AUCA CUGGUC C  UGU Ugc g   u
ccua       -    CCA    C      - AG   U   c ugu 


Annotation confidence Not enough data
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Genome context
chr21: 67844139-67844226 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from bta-mir-758
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-758

Accession MIMAT0009370
Description Bos taurus bta-miR-758 mature miRNA
Sequence 52 - UUUGUGACCUGGUCCACUAACC - 73
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125