miRBase entry: bta-mir-582

Stem-loop bta-mir-582


Accession
MI0009867
Description
Bos taurus bta-mir-582 precursor miRNA
Gene family
MIPF0000417; mir-582


Sequence

430 reads, 34 reads per million, 61 experiments
aucuguucucuuuggUUACAGUUGUUCAACCAGUUACUaaucuaccuaauuguaaccaguugaacaacugaacccaaagggugcaaagugaaaacauu
...(((.((((((((...((((((((((((..(((((..............)))))..))))))))))))...)))))))).))).............

Structure
----------auc   u        UUA            CA     Uaaucu 
             ugu cucuuugg   CAGUUGUUCAAC  GUUAC      a
             ||| ||||||||   ||||||||||||  |||||       
             acg gggaaacc   gucaacaaguug  caaug      c
uuacaaaagugaa   u        caa            ac     uuaauc 


Annotation confidence High
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Genome context
chr20: 19665474-19665571 [+]

Database links

Mature bta-miR-582

Accession MIMAT0009351
Description Bos taurus bta-miR-582 mature miRNA
Sequence 16 - UUACAGUUGUUCAACCAGUUACU - 38
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125