Stem-loop sequence bta-mir-502a-2

AccessionMI0009853 (change log)
DescriptionBos taurus miR-502a-2 stem-loop
Gene family MIPF0000139; mir-500
Literature search

2 open access papers mention bta-mir-502a-2
(2 sentences)

Stem-loop 
   cugcucugu  cc    aucc      aa       a    -g        
5'          uc  cugu    aaucuu  ugcccag ugca  guacugu 
            ||  ||||    ||||||  ||||||| ||||  |||||| c
3'          ag  gaca    uuagga  acggguc acgu  cgugacu 
   -----gaau  aa    ---c      --       c    aa
Get sequence
Deep sequencing
8983 reads, 205 reads per million, 77 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chrX: 93942730-93942819 [+]
intergenic
Clustered miRNAs
< 10kb from bta-mir-502a-2
bta-mir-532chrX: 93935413-93935498 [+]
bta-mir-188chrX: 93935739-93935824 [+]
bta-mir-502a-2chrX: 93942730-93942819 [+]
bta-mir-502bchrX: 93946864-93946946 [+]
bta-mir-362chrX: 93947354-93947418 [+]
bta-mir-500chrX: 93948610-93948693 [+]
bta-mir-660chrX: 93950762-93950841 [+]
bta-mir-502a-1chrX: 93952708-93952792 [+]
Database links

Mature sequence bta-miR-502a

Accession MIMAT0009338
Sequence

58 -  

aaugcaccugggcaaggauuca

 - 79

Get sequence
Deep sequencing22298 reads, 77 experiments
Evidence by similarity; MI0003186
Predicted targets

References

1
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).