Stem-loop sequence bta-mir-330

AccessionMI0009803 (change log)
DescriptionBos taurus miR-330 stem-loop
Gene family MIPF0000200; mir-330
Literature search

2 open access papers mention bta-mir-330
(3 sentences)

Stem-loop 
   cuuc   -  u a           --    -    u   ag    ugcaa 
5'     ggc ga c cugccucucug  ggcc ugug cuu  gcuc     g
       ||| || | |||||||||||  |||| |||| |||  ||||     a
3'     ucg cu g gacggagagac  ccgg acac gaa  cgag     u
   ---c   a  c c           gu    c    -   -a    ccaac
Get sequence
Deep sequencing
1774 reads, 2.94 reads per million, 68 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr18: 53898387-53898480 [-]
sense
ENSBTAT00000020933 ; EML2-201; intron 4
Database links

Mature sequence bta-miR-330

Accession MIMAT0009290
Sequence

57 -  

gcaaagcacacggccugcagaga

 - 79

Get sequence
Deep sequencing532 reads, 60 experiments
Evidence by similarity; MI0000803
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).