Stem-loop bta-mir-323

Accession

MI0009797

Description

Bos taurus bta-mir-323 precursor miRNA

Gene family

MIPF0000018; mir-154

Literature search

2 open access papers mention bta-mir-323
(4 sentences)

Sequence

152 reads, 7 reads per million, 47 experiments

uugguacuuggagagaggugguccguggcgcguucgcuuuauuuauggcGCACAUUACACGGUCGACCUCUuugcaguaucuaauc
..((((((.(.((((((((.(.(((((..(.((.((((........)))).)).)..))))).).)))))))).))))))).....

Structure

---uu      u g        g u     gc c  u    uua 
     gguacu g agagaggu g ccgug  g gu cgcu   u
     |||||| | |||||||| | |||||  | || ||||    
     cuauga c uuUCUCCA C GGCAC  U CA Gcgg   u
cuaau      - g        G U     AU A  C    uau 

Annotation confidence Not enough data

Genome context

chr21: 67843841-67843926 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from bta-mir-323

Mature bta-miR-323

• Accession: MIMAT0009284
• Description: Bos taurus bta-miR-323 mature miRNA
• Sequence: 50 - GCACAUUACACGGUCGACCUCU - 71
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125