Stem-loop sequence bta-mir-211

AccessionMI0009775 (change log)
DescriptionBos taurus miR-211 stem-loop
Gene family MIPF0000042; mir-204
Literature search

4 open access papers mention bta-mir-211
(22 sentences)

Stem-loop 
   -   ccug     -----     cug     u         ca     u    agggu 
5'  ucc    gcugu     gugac   ugggc ucccuuugu  uccuu gccc     u
    |||    |||||     |||||   ||||| |||||||||  ||||| ||||     c
3'  agg    cgaca     cacug   acucg ggggaaacg  aggga cggg     u
   g   --ua     cccuc     cug     u         ac     -    gugag
Get sequence
Deep sequencing
30348 reads, 268 reads per million, 65 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr21: 28130528-28130637 [-]
sense
ENSBTAT00000010233 ; TRPM1-201; intron 7
Database links

Mature sequence bta-miR-211

Accession MIMAT0009263
Sequence

26 -  

uucccuuugucauccuuugcc

 - 46

Get sequence
Deep sequencing30340 reads, 64 experiments
Evidence by similarity; MI0000287
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).