Stem-loop bta-mir-208b

Accession

MI0009774

Description

Bos taurus bta-mir-208b precursor miRNA

Gene family

MIPF0000178; mir-208

Literature search

3 open access papers mention bta-mir-208b
(14 sentences)

Sequence

38 reads, 2 reads per million, 18 experiments

ccucucagggaagcuuuuugcucgcguuauguuucucauccgaauAUAAGACGAACAAAAGGUUUGUcugagggcag
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))...

Structure

--c        g          c   cg        cu 
   cucucagg aagcuuuuug ucg  uuauguuu  c
   |||||||| |||||||||| |||  ||||||||  a
   gggagucU UUUGGAAAAC AGC  AAUAuaag  u
gac        G          A   AG        cc 

Annotation confidence Not enough data

Genome context

chr10: 21384239-21384315 [+]

Mature bta-miR-208b

• Accession: MIMAT0009262
• Description: Bos taurus bta-miR-208b mature miRNA
• Sequence: 46 - AUAAGACGAACAAAAGGUUUGU - 67
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125