Stem-loop sequence bta-mir-190a

AccessionMI0009762 (change log)
DescriptionBos taurus miR-190a stem-loop
Gene family MIPF0000076; mir-190
Literature search

5 open access papers mention bta-mir-190a
(12 sentences)

Stem-loop 
   u     c u    - ug               ua     uuau 
5'  gcagg c cugu g  auauguuugauauau  gguug    u
    ||||| | |||| |  |||||||||||||||  |||||     
3'  cguuc g gaca c  uauacaaacuauaua  ucaac    u
   c     u u    u cu               --     cuaa
Get sequence
Deep sequencing
840 reads, 1.49 reads per million, 67 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr10: 47479144-47479228 [-]
sense
ENSBTAT00000061376 ; TLN2-201; intron 55
Database links

Mature sequence bta-miR-190a

Accession MIMAT0009251
Sequence

15 -  

ugauauguuugauauauuaggu

 - 36

Get sequence
Deep sequencing775 reads, 67 experiments
Evidence experimental; Array [3], qRT-PCR [3]
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).
3
PMID:19170227 "Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach" Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M Mol Reprod Dev. 76:665-677(2009).