miRBase entry: bta-mir-181d

Stem-loop bta-mir-181d


Accession
MI0009754
Description
Bos taurus bta-mir-181d precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
19 open access papers mention bta-mir-181d
(44 sentences)

Sequence

3478 reads, 44 reads per million, 68 experiments
uccccucccuuaggccacagcgaaggucacaaucAACAUUCAUUGUUGUCGGUGGGUugugacagagaccagacccaccgagggaugaaugucacuguggcugggccagacac
............((((.((((......((((....(((((((((....((((((((((.((........))))))))))))..)))))))))...))))))))))))......

Structure
uccccucccuua    a    gaaggu    aucA         GUUG          g  aca 
            ggcc cagc      caca    ACAUUCAUU    UCGGUGGGUu ug   g
            |||| ||||      ||||    |||||||||    |||||||||| ||    
            ccgg gucg      gugu    uguaaguag    agccacccag ac   a
------cacaga    -    ------    -cac         --gg          -  cag 


Annotation confidence Not enough data
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Genome context
chr7: 12978911-12979023 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-181d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-181d

Accession MIMAT0009243
Description Bos taurus bta-miR-181d mature miRNA
Sequence 35 - AACAUUCAUUGUUGUCGGUGGGU - 57
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125