miRBase entry: bta-mir-147

Stem-loop bta-mir-147


Accession
MI0009747
Description
Bos taurus bta-mir-147 precursor miRNA
Gene family
MIPF0000105; mir-147

Literature search
3 open access papers mention bta-mir-147
(12 sentences)

Sequence

3765 reads, 86 reads per million, 67 experiments
uaugaaucuaguggaaacacuucugcacaggcuagauuauggauaccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagg
...((((.((((((((.((.((((((((((((((.....)))...))..))))))))).)).)))))))).)))).....

Structure
--uau    c        a  c         --  ---   g 
     gaau uaguggaa ca uucugcaca  gg   cua a
     |||| |||||||| || |||||||||  ||   ||| u
     uuua AUCGUCUU GU AAGGCGUGU  cc   ggu u
ggauu    c        C  A         Ga  aua   a 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr10: 65449944-65450023 [-]

Database links

Mature bta-miR-147

Accession MIMAT0009237
Description Bos taurus bta-miR-147 mature miRNA
Sequence 49 - GUGUGCGGAAAUGCUUCUGCUA - 70
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125