Stem-loop sequence bta-mir-146b

AccessionMI0009745 (change log)
DescriptionBos taurus miR-146b stem-loop
Gene family MIPF0000103; mir-146
Literature search

19 open access papers mention bta-mir-146b
(50 sentences)

Stem-loop 
   uaagagaacuu    -  -  u   u  g        a    a    cu  ga  u 
5'            uggc ca cc ggc cu agaacuga uucc uagg  gu  gc c
              |||| || || ||| || |||||||| |||| ||||  ||  ||  
3'            aucg gu gg ccg gg ucuugacu aggg aucc  ua  cg u
   ----cuaccac    u  c  c   u  -        c    -    cg  aa  a
Get sequence
Deep sequencing
89079 reads, 1.18e+03 reads per million, 75 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr26: 23050499-23050604 [+]
intergenic
Database links

Mature sequence bta-miR-146b

Accession MIMAT0009235
Sequence

26 -  

ugagaacugaauuccauaggcugu

 - 49

Get sequence
Deep sequencing89017 reads, 75 experiments
Evidence by similarity; MI0004665
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).