Stem-loop sequence bta-mir-135b

AccessionMI0009738 (change log)
DescriptionBos taurus miR-135b stem-loop
Gene family MIPF0000028; mir-135
Literature search

6 open access papers mention bta-mir-135b
(15 sentences)

Stem-loop 
   -----------   u                   cau          uuacug 
5'            cuc gcuguggccuauggcuuuu   uccuauguga      u
              ||| |||||||||||||||||||   ||||||||||       
3'            gag ugacaucggguaccgaaaa   gggauguacu      u
   ccgcgcgcggg   -                   -uc          caaacc
Get sequence
Deep sequencing
176 reads, 1.82 reads per million, 55 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr16: 3040637-3040731 [-]
intergenic
Database links

Mature sequence bta-miR-135b

Accession MIMAT0009229
Sequence

14 -  

uauggcuuuucauuccuauguga

 - 36

Get sequence
Deep sequencing166 reads, 53 experiments
Evidence by similarity; MI0000810
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).