Stem-loop sequence bta-mir-129-1

AccessionMI0009728 (change log)
DescriptionBos taurus miR-129-1 stem-loop
Gene family MIPF0000073; mir-129
Literature search

5 open access papers mention bta-mir-129-1
(11 sentences)

Stem-loop 
       -       c   cu      g   uu cu  c 
5' ggau cuuuuug ggu  gggcuu cug  c  cu u
   |||| ||||||| |||  |||||| |||  |  ||  
3' ucua gaaaaac cca  cccgaa gac  g  ga a
       u       c   uu      g   -u au  c
Get sequence
Deep sequencing
1573 reads, 1.54 reads per million, 65 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr4: 93534084-93534155 [+]
sense
ENSBTAT00000042294 ; bta-mir-129-1-201; exon 1
Database links

Mature sequence bta-miR-129

Accession MIMAT0009220
Sequence

5 -  

cuuuuugcggucugggcuugcu

 - 26

Get sequence
Deep sequencing1259 reads, 61 experiments
Evidence experimental; cloned [3]
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).
3
PMID:19758457 "Characterization of bovine miRNAs by sequencing and bioinformatics analysis" Jin W, Grant JR, Stothard P, Moore SS, Guan LL BMC Mol Biol. 10:90(2009).