miRBase entry: dya-mir-2c

Stem-loop dya-mir-2c

Accession

MI0009672

Description

Drosophila yakuba dya-mir-2c precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

ucguaucuuacuuucaaugucaucaaaaagggcugaagaaagauauuucugcauuugaaucgUAUCACAGCCAGCUUUGAUGGGCauugcaaugagcaucga
(((...((((.((.(((((((((((((...(((((......((((((((.......)))..))))).)))))...)))))).))))))).))))))...)))

Structure

   uau    c  u       -      aag     aagaaa     --   ug 
ucg   cuua uu caauguc aucaaa   ggcug      gauau  uuc  c
|||   |||| || ||||||| ||||||   |||||      |||||  |||  a
agc   gagu aa guuaCGG UAGUUU   CCGAC      CUAUg  aag  u
   uac    -  c       G      CGA     -----A     cu   uu

Annotation confidence Not enough data

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Genome context

chr3R: 15188361-15188462 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dya-mir-2c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-2c

Accession	MIMAT0009097
Description	Drosophila yakuba dya-miR-2c mature miRNA
Sequence	63 - UAUCACAGCCAGCUUUGAUGGGC - 85
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218