miRBase entry: dya-mir-133

Stem-loop dya-mir-133


Accession
MI0009644
Description
Drosophila yakuba dya-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

ugcaacgcuguguguagcugguugacaucgggucagaucuguuuuuccaagcauUUGGUCCCCUUCAACCAGCUGUagccagugguugau
..((((((((..(((((((((((((....(((((((((((.........)).)))))).)))..)))))))))))))..)))).))))..

Structure
ug    -    ug             cauc   -      -  guu 
  caac gcug  uguagcugguuga    ggg ucagau cu   u
  |||| ||||  |||||||||||||    ||| |||||| ||   u
  guug ugac  aUGUCGACCAACU    CCC GGUUua ga   u
ua    g    cg             --UC   U      c  acc 


Annotation confidence Not enough data
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Genome context
chr2R: 6964811-6964900 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-133
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-133

Accession MIMAT0009072
Description Drosophila yakuba dya-miR-133 mature miRNA
Sequence 55 - UUGGUCCCCUUCAACCAGCUGU - 76
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218