miRBase entry: dya-mir-306

Stem-loop dya-mir-306

Accession

MI0009641

Description

Drosophila yakuba dya-mir-306 precursor miRNA

Gene family

MIPF0000313; mir-306

Sequence

guccacucgguggcUCAGGUACUUAGUGACUCUCAAugcuuuugacauuuuGGGGGUCACUCUGUGCCUGUGCugccaguaggac
(((((((.((((((.(((((((..(((((((((((((((....).)))..)))))))))))..))))))).))))))))).))))

Structure

    -   c      U       UU           --   - u 
gucc acu gguggc CAGGUAC  AGUGACUCUCA  Aug c u
|||| ||| |||||| |||||||  |||||||||||  ||| |  
cagg uga ccguCG GUCCGUG  UCACUGGGGGu  uac g u
    a   -      U       UC           uu   a u

Annotation confidence Not enough data

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Genome context

chr2R: 4404563-4404647 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dya-mir-306

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-306-5p

Accession	MIMAT0009068
Description	Drosophila yakuba dya-miR-306-5p mature miRNA
Sequence	15 - UCAGGUACUUAGUGACUCUCAA - 36
Evidence	not_experimental

Mature dya-miR-306-3p

Accession	MIMAT0009069
Description	Drosophila yakuba dya-miR-306-3p mature miRNA
Sequence	52 - GGGGGUCACUCUGUGCCUGUGC - 73
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218