miRBase entry: dwi-mir-288

Stem-loop dwi-mir-288

Accession

MI0009624

Description

Drosophila willistoni dwi-mir-288 precursor miRNA

Gene family

MIPF0000223; mir-288

Sequence

caggucguaauuagcagcgcacaacauucgucggcgauaauuaaugacguuggucacguuggUUUCAUGUCGAUUUCAUUUCAUGacacggccg
..((((((.....((...)).........(((((((..((((((((((....))))..))))))...))))))).............)))))).

Structure

ca      aauuagcagcgcacaacauuc       -au      --    g 
  ggucgu                     gucggcg   aauuaa  ugac u
  ||||||                     |||||||   ||||||  ||||  
  ccggca                     UAGCUGU   UUgguu  acug u
-g      --------caGUACUUUACUU       ACU      gc    g

Annotation confidence Not enough data

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Genome context

scf2_1100000004521: 2031457-2031550 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-288

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-288

Accession	MIMAT0009050
Description	Drosophila willistoni dwi-miR-288 mature miRNA
Sequence	63 - UUUCAUGUCGAUUUCAUUUCAUG - 85
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218