miRBase entry: dwi-mir-281-1

Stem-loop dwi-mir-281-1


Accession
MI0009620
Description
Drosophila willistoni dwi-mir-281-1 precursor miRNA
Gene family
MIPF0000087; mir-46


Sequence

cgaauaagugaauaAAGAGAGCUGUCCGUCGACAGUccaguuaaacgauuuuaaaacUGUCAUGGAAUUGCUCUCUUUGUaugauauucg
((((((.....(((((((((((..(((((.((((((....(((((....))))).)))))))))))...)))))))))))....))))))

Structure
      aguga           -UG     C      ccag     c 
cgaaua     auaAAGAGAGC   UCCGU GACAGU    uuaaa g
||||||     |||||||||||   ||||| ||||||    |||||  
gcuuau     UGUUUCUCUCG   AGGUA CUGUca    aauuu a
      -agua           UUA     -      ---a     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scf2_1100000004954: 3241883-3241972 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dwi-mir-281-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-281-3p

Accession MIMAT0008995
Description Drosophila willistoni dwi-miR-281-3p mature miRNA
Sequence 58 - UGUCAUGGAAUUGCUCUCUUUGU - 80
Evidence not_experimental

Mature dwi-miR-281-1-5p

Accession MIMAT0008994
Description Drosophila willistoni dwi-miR-281-1-5p mature miRNA
Sequence 15 - AAGAGAGCUGUCCGUCGACAGU - 36
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218