miRBase entry: dwi-mir-275

Stem-loop dwi-mir-275


Accession
MI0009617
Description
Drosophila willistoni dwi-mir-275 precursor miRNA
Gene family
MIPF0000187; mir-275


Sequence

gucucuuaccuugcgcgcuaaucagugaccagggcugaguaauuuuauucaauacagUCAGGUACCUGAAGUAGCGCGCGugguuuuagacca
((((...(((.(((((((((.((((..(((..(((((.................))))).)))..))))..))))))))).)))...))))..

Structure
--    cuu   u         -a    ug   ag     aguaauu 
  gucu   acc ugcgcgcua  ucag  acc  ggcug       u
  ||||   ||| |||||||||  ||||  |||  |||||       u
  caga   ugg GCGCGCGAU  AGUC  UGG  CUgac       a
ac    uuu   u         GA    CA   -A     auaacuu 


Annotation confidence Not enough data
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Genome context
scf2_1100000004585: 5257600-5257692 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dwi-mir-275
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-275

Accession MIMAT0009045
Description Drosophila willistoni dwi-miR-275 mature miRNA
Sequence 58 - UCAGGUACCUGAAGUAGCGCGCG - 80
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218