miRBase entry: dwi-mir-2c

Stem-loop dwi-mir-2c


Accession
MI0009603
Description
Drosophila willistoni dwi-mir-2c precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

ucuuacuuucaaugucaucaaaaagggcugaagaaagauauuuuugcauuugaagcgUAUCACAGCCAGCUUUGAUGGGCauugcaaugagca
.((((.((.(((((((((((((...(((((......(((((.(((.......))).))))).)))))...)))))).))))))).))))))..

Structure
-u    c  u       -      aag     aagaaa     u   gc 
  cuua uu caauguc aucaaa   ggcug      gauau uuu  a
  |||| || ||||||| ||||||   |||||      ||||| |||  u
  gagu aa guuaCGG UAGUUU   CCGAC      CUAUg gaa  u
ac    -  c       G      CGA     -----A     c   gu 


Annotation confidence Not enough data
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Genome context
scf2_1100000004902: 2143534-2143626 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dwi-mir-2c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-2c

Accession MIMAT0009035
Description Drosophila willistoni dwi-miR-2c mature miRNA
Sequence 58 - UAUCACAGCCAGCUUUGAUGGGC - 80
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218