miRBase entry: dwi-mir-13a

Stem-loop dwi-mir-13a

Accession

MI0009597

Description

Drosophila willistoni dwi-mir-13a precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

uacguaacucuucaaggggguugugaaauguugccauuuuauucaacucaUAUCACAGCCAUUUUGAUGAGUuucgug
((((.(((((.((((((.((((((((.(((..................))).)))))))).)))))).))))).))))

Structure

    u     u      g        a   uugccauu 
uacg aacuc ucaagg gguuguga aug        u
|||| ||||| |||||| |||||||| |||         
gugc uUGAG AGUUUU CCGACACU Uac        u
    u     U      A        A   ucaacuua

Annotation confidence Not enough data

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Genome context

scf2_1100000004902: 2143221-2143298 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dwi-mir-13a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-13a

Accession	MIMAT0009030
Description	Drosophila willistoni dwi-miR-13a mature miRNA
Sequence	51 - UAUCACAGCCAUUUUGAUGAGU - 72
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218