miRBase entry: dwi-mir-79-1

Stem-loop dwi-mir-79-1


Accession
MI0009579
Description
Drosophila willistoni dwi-mir-79-1 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

uugccuaugcuuuggcgcuuuagcuguaugauagauuugacuacuucaUAAAGCUAGAUUACCAAAGCAUgggcuc
..(((((((((((((...(((((((.((((((((......)))..))))).)))))))...)))))))))))))..

Structure
uu             cgc       g     --   au 
  gccuaugcuuugg   uuuagcu uauga  uag  u
  |||||||||||||   ||||||| |||||  |||   
  cgggUACGAAACC   AGAUCGA AUacu  auc  u
cu             AUU       A     uc   ag 


Annotation confidence Not enough data
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Genome context
scf2_1100000004874: 28872-28947 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from dwi-mir-79-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-79

Accession MIMAT0008981
Description Drosophila willistoni dwi-miR-79 mature miRNA
Sequence 49 - UAAAGCUAGAUUACCAAAGCAU - 70
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218