miRBase entry: dwi-mir-34

Stem-loop dwi-mir-34

Accession

MI0009551

Description

Drosophila willistoni dwi-mir-34 precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

uggcuaugcgcuuUGGCAGUGUGGUUAGCUGGUUGuguagccaauuaaauugccaaaacaauaaaccacagccacuaucuucacugccgccgcgacaggc
..(((.(((((..((((((((.((.(((.((((((((.............................))))))))))).)).))))))))..))).)))))

Structure

ug   a  -   uu        U  U   C        uagccaauuaaau 
  gcu ug cgc  UGGCAGUG GG UAG UGGUUGug             u
  ||| || |||  |||||||| || ||| ||||||||             g
  cgg ac gcg  gccgucac uc auc accgacac             c
--   -  a   cc        u  u   -        caaauaacaaaac

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scf2_1100000004902: 11166538-11166637 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-34

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-34

Accession	MIMAT0008983
Description	Drosophila willistoni dwi-miR-34 mature miRNA
Sequence	14 - UGGCAGUGUGGUUAGCUGGUUG - 35
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218