Stem-loop sequence dvi-mir-318

AccessionMI0009489 (change log)
DescriptionDrosophila virilis miR-318 stem-loop
Gene family MIPF0000259; mir-318
Stem-loop 
   u          c  c         uuuguca     c 
5'  uuaugggaua ac aaguucagu       gaugu c
    |||||||||| || |||||||||       |||||  
3'  aauacucuau ug uucggguca       cuacg a
   g          u  u         -------     a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (DroVir3) Overlapping transcripts
scaffold_13047: 1194332-1194400 [+]
intergenic
Clustered miRNAs
< 10kb from dvi-mir-318
dvi-mir-9717scaffold_13047: 1194059-1194115 [+]
dvi-mir-994scaffold_13047: 1194168-1194274 [+]
dvi-mir-318scaffold_13047: 1194332-1194400 [+]
Database links

Mature sequence dvi-miR-318

Accession MIMAT0008922
Sequence

44 -  

ucacugggcuuuguuuaucuca

 - 65

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).
2
PMID:24448446 "Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis" Ninova M, Ronshaugen M, Griffiths-Jones S RNA. 20:360-372(2014).