Stem-loop dvi-mir-263a

Accession

MI0009486

Description

Drosophila virilis dvi-mir-263a precursor miRNA

Gene family

MIPF0000122; mir-263

Sequence

aucucggcacaguuAAUGGCACUGGAAGAAUUCACGGGguuuuuauaacacgccCGUGAUCUCUUAGUGGCAUCUAuggugcgggauau
((((((.(((.((..(((.((((((.(((..(((((((((.........)).)))))))))).)))))).)))..)).)))))))))..

Structure

--      g   a  uA   G      A   AU       -  uuu 
  aucucg cac gu  AUG CACUGG AGA  UCACGGG gu   u
  |||||| ||| ||  ||| |||||| |||  ||||||| ||   a
  uagggc gug uA  UAC GUGAUU UCU  AGUGCcc ca   u
ua      -   g  UC   G      C   --       g  caa 

Annotation confidence Not enough data

Genome context

scaffold_12963: 13235111-13235199 [+]

Mature dvi-miR-263a-5p

• Accession: MIMAT0008919
• Description: Drosophila virilis dvi-miR-263a-5p mature miRNA
• Sequence: 15 - AAUGGCACUGGAAGAAUUCACGGG - 38
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-263a-3p

• Accession: MIMAT0032051
• Description: Drosophila virilis dvi-miR-263a-3p mature miRNA
• Sequence: 55 - CGUGAUCUCUUAGUGGCAUCUA - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372