miRBase entry: dsi-mir-287

Stem-loop dsi-mir-287

Accession

MI0009466

Description

Drosophila simulans dsi-mir-287 precursor miRNA

Gene family

MIPF0000224; mir-287

Sequence

uguagggucggaaauuuugcacacauuuacaauaauuguaaaUGUGUUGAAAAUCGUUUGCACgacuguga
..((.(((((((((((((..((((((((((((...))))))))))))..)))...)))).).))))).)).

Structure

ug  g     - -    ---   gc            u 
  ua ggucg g aaau   uuu  acacauuuacaa  
  || ||||| | ||||   |||  |||||||||||| a
  gu ucagC C UUUG   AAA  UGUGUaaauguu  
-a  g     A G    CUA   GU            a

Annotation confidence Not enough data

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Genome context

chr2L: 17277853-17277923 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-287

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-287

Accession	MIMAT0008899
Description	Drosophila simulans dsi-miR-287 mature miRNA
Sequence	43 - UGUGUUGAAAAUCGUUUGCAC - 63
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218