miRBase entry: dsi-mir-282

Stem-loop dsi-mir-282


Accession
MI0009449
Description
Drosophila simulans dsi-mir-282 precursor miRNA
Gene family
MIPF0000150; mir-282


Sequence

aguuuccuuuuaAAUCUAGCCUCUACUAGGCUUUGUCUGUgcauucgaaagccgaucagacauagccuauaagagguuagguguaccaaggcgaaca
.((((((((....(((((((((((..((((((.((((((..(...........)..)))))).))))))..))))))))))).....)))).)))).

Structure
a    -    -uuaA           AC      U      Ug auuc 
 guuu ccuu     AUCUAGCCUCU  UAGGCU UGUCUG  c    g
 |||| ||||     |||||||||||  |||||| ||||||  |    a
 caag ggaa     uggauuggaga  auccga acagac  g    a
a    c    ccaug           au      u      ua ccga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3L: 2784396-2784492 [+]

Database links

Mature dsi-miR-282

Accession MIMAT0008883
Description Drosophila simulans dsi-miR-282 mature miRNA
Sequence 13 - AAUCUAGCCUCUACUAGGCUUUGUCUGU - 40
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218