miRBase entry: dsi-let-7

Stem-loop dsi-let-7


Accession
MI0009441
Description
Drosophila simulans dsi-let-7 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

ucuggcaaauUGAGGUAGUAGGUUGUAUAGUaguaauuacacaucauacuauacaaugugcuagcuuucuuugcuuga
((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).))

Structure
  u      uU   G     G           guaauu 
uc ggcaaa  GAG UAGUA GUUGUAUAGUa      a
|| ||||||  ||| ||||| |||||||||||       
ag ucguuu  uuc aucgu uaacauaucau      c
  u      cu   g     g           acuaca 


Annotation confidence Not enough data
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Genome context
chr2L: 18160945-18161022 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dsi-let-7
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-let-7

Accession MIMAT0008876
Description Drosophila simulans dsi-let-7 mature miRNA
Sequence 11 - UGAGGUAGUAGGUUGUAUAGU - 31
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218