miRBase entry: dsi-mir-87

Stem-loop dsi-mir-87


Accession
MI0009409
Description
Drosophila simulans dsi-mir-87 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

cacauuucauucgcgccuguaucuugcugaaccgcugccaucauggccaacgauccggUUGAGCAAAAUUUCAGGUGUGugagaaauguguu
((((((((.(.((((((((.((.(((((.(((((..((((...))))........))))).))))).))..)))))))).).))))))))..

Structure
--        a u        -u  c     g     ------cu    u 
  cacauuuc u cgcgccug  au uugcu aaccg        gcca  
  |||||||| | ||||||||  || ||||| |||||        |||| c
  guguaaag g GUGUGGAC  UA AACGA UUggc        cggu  
uu        a u        UU  A     G     cuagcaac    a 


Annotation confidence Not enough data
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Genome context
chr2L: 9739866-9739957 [-]

Database links

Mature dsi-miR-87

Accession MIMAT0008844
Description Drosophila simulans dsi-miR-87 mature miRNA
Sequence 59 - UUGAGCAAAAUUUCAGGUGUG - 79
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218