miRBase entry: dse-mir-31b

Stem-loop dse-mir-31b


Accession
MI0009385
Description
Drosophila sechellia dse-mir-31b precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

caaauaaugaauuUGGCAAGAUGUCGGAAUAGCUGagagcacagcggaucgagccucuuaucguccgaaaaaaugugauuauuuuugaaaagcggcuaugccucaucuagucaauugcauuacuuug
(((((((((...(((((.(((((..((.(((((((.........((((.(((........))))))).(((((((....)))))))......))))))).)).))))).)))))...))))).))))

Structure
    -     aau     A     UC  A       ----------------agagcacag    u   gcc 
caaa uaaug   uUGGC AGAUG  GG AUAGCUG                         cgga cga   u
|||| |||||   ||||| |||||  || |||||||                         |||| |||    
guuu auuac   aacug ucuac  cc uaucggc                         gccu gcu   c
    c     guu     a     -u  g       gaaaaguuuuuauuaguguaaaaaa    -   auu 


Annotation confidence Not enough data
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Genome context
scaffold_34: 250184-250310 [-]

Database links

Mature dse-miR-31b

Accession MIMAT0008823
Description Drosophila sechellia dse-miR-31b mature miRNA
Sequence 14 - UGGCAAGAUGUCGGAAUAGCUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218