Stem-loop dse-mir-33

Accession

MI0009364

Description

Drosophila sechellia dse-mir-33 precursor miRNA

Gene family

MIPF0000070; mir-33

Sequence

cggagaugacacgaAGGUGCAUUGUAGUCGCAUUGucugucccaauugcuucaggcaauacaacuucagugcaagcucugugcauuucac
..((((((.((((.((.(((((((.(((.(.((((((((............)))))))).).))).)))))))..)).))))))))))..

Structure

cg      a    a  -G       U   C C        uccca 
  gagaug cacg AG  UGCAUUG AGU G AUUGucug     a
  |||||| |||| ||  ||||||| ||| | ||||||||      
  cuuuac gugu uc  acgugac uca c uaacggac     u
ca      -    c  ga       u   a a        uucgu 

Annotation confidence Not enough data

Genome context

scaffold_29: 452766-452855 [+]

Mature dse-miR-33

• Accession: MIMAT0008802
• Description: Drosophila sechellia dse-miR-33 mature miRNA
• Sequence: 15 - AGGUGCAUUGUAGUCGCAUUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218